Skip to main content

Sequence ID Extraction

Extract unique sequence IDs from alignment files.

Steps​

  1. Select the Alignment button from the navigation bar.
  2. Select Extract sequence IDs from the dropdown menu.
  3. Add the input files by clicking the Add file button. On desktop platforms, you can also input a directory by clicking the Add directory button. The app will look for matching files in the directory.
  4. Select the output directory by clicking the Add directory button.
  5. Add prefix for the output files.
  6. Map sequence IDs (optional). See Sequence ID Mapping for more details.
  7. Click the Run button labeled Extract to start the task.

Output​

The app will generate a file containing the list of unique sequence IDs in your dataset. The default name is the prefix input.